STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000069702Mucosa-associated lymphoid tissue lymphoma translocation protein 1-like. (720 aa)    
Predicted Functional Partners:
ENSSGRP00000009650
Caspase recruitment domain family, member 11.
    
 0.936
card11
Caspase recruitment domain-containing protein 11.
    
 0.936
ENSSGRP00000044133
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
 0.915
LOC107562521
TNF receptor-associated factor 6-like.
    
 0.878
ENSSGRP00000102158
TNF receptor-associated factor 6-like.
    
 0.878
traf6
TNF receptor-associated factor 6 isoform X1.
    
 0.878
LOC107581928
TNF receptor-associated factor 4-like.
    
 0.845
Ikbkb
Inhibitor of nuclear factor kappa-B kinase subunit beta.
   
 0.758
bcl10
B-cell lymphoma/leukemia 10 isoform X1.
     
 0.708
ENSSGRP00000036872
Mitogen-activated protein kinase kinase kinase 7.
   
 0.684
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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