STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107560627F-box only protein 46-like. (662 aa)    
Predicted Functional Partners:
skp1
S-phase kinase-associated protein 1 isoform X1.
    
 
 0.808
ENSSGRP00000112828
Zmp:0000000619.
      
 0.627
ENSSGRP00000008194
Receptor activity modifying protein 1.
    
 0.578
ENSSGRP00000112711
annotation not available
    
 0.578
LOC107586036
Calcitonin gene-related peptide-like.
    
 0.552
LOC107593372
Calcitonin-1-like isoform X1.
    
 0.552
LOC107566996
Corticotropin-releasing hormone.
    
 0.537
ENSSGRP00000053252
Corticotropin-releasing hormone.
    
 0.537
LOC107590339
Corticotropin-releasing hormone.
    
 0.537
ENSSGRP00000094018
Urotensin 1.
    
 0.537
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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