STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107589143Transforming growth factor beta-2-like. (414 aa)    
Predicted Functional Partners:
LOC107565639
Decorin-like.
    
 0.940
LOC107585689
Decorin-like.
    
 0.940
LOC107569139
TGF-beta receptor type-2-like.
   
 0.932
LOC107551196
TGF-beta receptor type-2-like.
   
 0.932
LOC107600517
TGF-beta receptor type-2-like isoform X1.
   
 0.932
LOC107575999
Fibromodulin-like.
    
 0.920
LOC107556092
Fibromodulin-like.
    
 0.920
LOC107555932
TGF-beta receptor type-2-like.
   
 0.915
LOC107596078
TGF-beta receptor type-2-like isoform X1.
   
 0.915
ENSSGRP00000019785
Transforming growth factor beta receptor 2a.
   
 0.816
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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