STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000074414Nidogen (entactin). (71 aa)    
Predicted Functional Partners:
ENSSGRP00000022150
Heparan sulfate proteoglycan 2.
   
 0.719
ENSSGRP00000106368
Heparan sulfate proteoglycan 2.
   
 0.719
ENSSGRP00000047944
annotation not available
   
 0.622
ENSSGRP00000083852
annotation not available
   
 0.622
ENSSGRP00000075523
Laminin subunit alpha-4-like.
   
 0.572
LOC107591095
Agrin-like isoform X1.
   
 0.561
ENSSGRP00000006808
annotation not available
   
 0.561
ENSSGRP00000027081
Agrin-like.
   
 0.561
ENSSGRP00000083849
annotation not available
   
 0.549
dhx9
Laminin subunit gamma-1.
   
 0.544
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.