STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107582375Sortilin. (815 aa)    
Predicted Functional Partners:
ENSSGRP00000001831
Cyclin-G-associated kinase-like isoform X1.
     
 0.928
gak
Cyclin-G-associated kinase isoform X1.
     
 0.928
ENSSGRP00000079901
Cyclin G associated kinase.
     
 0.928
ENSSGRP00000056488
annotation not available
    
 
 0.919
ENSSGRP00000067658
annotation not available
    
 
 0.919
LOC107550487
Sortilin-like.
  
  
 
0.901
LOC107591814
Sortilin-like.
  
  
 
0.901
LOC107595107
Brain-derived neurotrophic factor isoform X1.
    
 
 0.835
ENSSGRP00000047289
Tumor necrosis factor receptor superfamily member 16-like.
    
 
 0.823
LOC107560014
Proteasome subunit alpha type-4.
    
 
 0.721
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.