STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccn6WNT1-inducible-signaling pathway protein 3. (335 aa)    
Predicted Functional Partners:
LOC107570486
Wingless-type MMTV integration site family, member 1.
      
 0.628
ENSSGRP00000062151
Wingless-type MMTV integration site family, member 1.
      
 0.628
Smpdl3a
Acid sphingomyelinase-like phosphodiesterase 3a.
      
 0.614
ENSSGRP00000096581
Sphingomyelin phosphodiesterase acid like 3A.
      
 0.614
LOC107555938
Myosin light chain 1, skeletal muscle isoform-like.
      
 0.518
LOC107596080
Myosin light chain 1, skeletal muscle isoform-like.
      
 0.518
ENSSGRP00000063088
LOW QUALITY PROTEIN: von Willebrand factor-like.
      
 0.518
ENSSGRP00000012941
Connective tissue growth factor-like.
  
   
0.506
LOC107556147
Connective tissue growth factor-like.
  
   
0.506
LOC107588234
Von Willebrand factor D and EGF domain-containing protein-like.
    
 
 0.412
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.