STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000079245Zinc finger DHHC-type containing 13. (286 aa)    
Predicted Functional Partners:
ENSSGRP00000014530
Huntingtin-like.
    
 
 0.553
ENSSGRP00000074314
Huntingtin-like isoform X1.
    
 
 0.553
LOC107596181
Ankyrin repeat family A protein 2-like.
  
 
 
 0.531
LOC107596806
Ankyrin repeat family A protein 2-like.
  
 
 
 0.528
ENSSGRP00000041373
Ankyrin repeat and SOCS box containing 14b.
  
 
   0.518
LOC107595467
L-asparaginase-like isoform X1.
  
    0.517
gabpb2
GA-binding protein transcription factor, beta.
  
 
   0.512
LOC107588481
GA-binding protein subunit beta-2-like isoform X1.
  
 
   0.512
LOC107559717
GA-binding protein subunit beta-1-like isoform X1.
  
 
   0.511
LOC107560887
Ankyrin repeat and SOCS box protein 14.
  
 
   0.511
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.