STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107554610CCAAT/enhancer binding protein (C/EBP), gamma. (167 aa)    
Predicted Functional Partners:
Atf4
Cyclic AMP-dependent transcription factor ATF-4 isoform X1.
   
 0.924
ENSSGRP00000021000
Cyclic AMP-dependent transcription factor ATF-4-like.
   
 0.924
LOC107585034
Cyclic AMP-dependent transcription factor ATF-4-like isoform X1.
   
 0.914
LOC107582897
Cyclic AMP-dependent transcription factor ATF-4-like.
   
 0.914
ddit3
DNA damage-inducible transcript 3 protein isoform X1.
   
 0.860
COX2
Cytochrome c oxidase subunit II.
    
 0.758
LOC107587340
Uncharacterized protein LOC107587340.
   
 0.721
LOC107597628
Uncharacterized protein LOC107597628.
   
 0.721
COX3
Cytochrome c oxidase subunit III.
    
 0.644
LOC107553464
Cyclic AMP-dependent transcription factor ATF-3-like.
   
 0.632
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.