STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107592301Nucleolysin TIA-1-like isoform X1. (357 aa)    
Predicted Functional Partners:
ENSSGRP00000027190
Pre-mRNA 3'-end-processing factor FIP1-like.
   
 0.846
LOC107550069
Cleavage and polyadenylation specificity factor subunit 1-like.
   
 0.832
ENSSGRP00000090314
Cleavage stimulation factor subunit 3-like.
   
 0.804
cstf3
Cleavage stimulation factor subunit 3.
   
 0.804
ncbp2
Nuclear cap-binding protein subunit 2.
  
 
 0.801
LOC107581576
Serine/arginine-rich splicing factor 2-like.
  
0.788
LOC107566380
Serine/arginine-rich splicing factor 2-like.
  
0.788
snrpd2
Small nuclear ribonucleoprotein Sm D2 isoform X1.
   
 0.768
LOC107557830
Small nuclear ribonucleoprotein Sm D2-like.
   
 0.768
LOC107596039
Polyadenylate-binding protein 2-B-like isoform X1.
  
 0.767
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.