STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107596551Partitioning defective 6 homolog gamma-like. (413 aa)    
Predicted Functional Partners:
ENSSGRP00000007771
Atypical protein kinase C iota type.
    
 0.988
LOC107548418
Protein kinase C zeta type-like isoform X1.
    
 0.988
ENSSGRP00000065951
Atypical protein kinase C iota type.
    
 0.988
cdc42
Cell division control protein 42 homolog isoform X1.
    
 0.982
ENSSGRP00000079890
Cell division control protein 42 homolog isoform X1.
    
 0.982
LOC107552852
Cell division control protein 42 homolog isoform X1.
    
 0.971
LOC107553288
MAGUK p55 subfamily member 5-A-like.
    
 0.942
ENSSGRP00000042890
MAGUK p55 subfamily member 5-A-like.
    
 0.942
ENSSGRP00000073549
MAGUK p55 subfamily member 5-A-like isoform X1.
    
 0.942
ENSSGRP00000094771
MAGUK p55 subfamily member 5-A-like.
    
 0.942
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.