STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107567272Ras-related protein Rab-4B. (213 aa)    
Predicted Functional Partners:
ENSSGRP00000012934
Intersectin 2a.
    
 0.873
ENSSGRP00000074134
Intersectin-2-like.
    
 0.873
ENSSGRP00000084141
Intersectin 2b.
    
 0.873
LOC107594821
Intersectin-2-like isoform X1.
    
 0.873
Rbsn
Rabenosyn-5.
    
 
 0.855
LOC107549571
Rabenosyn-5-like isoform X1.
    
 
 0.855
ENSSGRP00000063770
Intersectin 1 (SH3 domain protein).
    
 0.777
ENSSGRP00000070211
LOW QUALITY PROTEIN: intersectin-1-like.
    
 0.777
RABGGTB
Geranylgeranyl transferase type-2 subunit beta-like isoform X1.
    
 0.753
LOC107574004
Proto-oncogene tyrosine-protein kinase Met.
   
  0.731
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.