STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107558441E3 ubiquitin-protein ligase pellino homolog 1-like. (477 aa)    
Predicted Functional Partners:
LOC107572061
Ubiquitin-conjugating enzyme E2 variant 1.
    
 0.879
irak4
Interleukin-1 receptor-associated kinase 4.
    
 0.869
irak1
Interleukin-1 receptor-associated kinase 1 isoform X1.
    
 0.825
ENSSGRP00000064951
Interleukin-1 receptor-associated kinase 1.
    
 0.825
LOC107562521
TNF receptor-associated factor 6-like.
   
 0.668
ENSSGRP00000102158
TNF receptor-associated factor 6-like.
   
 0.668
traf6
TNF receptor-associated factor 6 isoform X1.
   
 0.668
LOC107581928
TNF receptor-associated factor 4-like.
   
 0.651
Ikbkb
Inhibitor of nuclear factor kappa-B kinase subunit beta.
   
 0.592
ENSSGRP00000008095
Ubiquitin-conjugating enzyme E2 N-like.
    
 0.580
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.