STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107562204Diamine acetyltransferase 1-like. (170 aa)    
Predicted Functional Partners:
odc1
Ornithine decarboxylase isoform X1.
    
 0.944
ENSSGRP00000085718
Ornithine decarboxylase 1-like.
    
 0.944
LOC107570652
Spermidine synthase-like isoform X1.
    
 0.930
LOC107586563
Spermidine synthase-like.
    
 0.930
ENSSGRP00000094109
Amine oxidase [flavin-containing]-like.
     
 0.907
LOC107565948
Amine oxidase [flavin-containing].
     
 0.907
LOC107553388
Amiloride-sensitive amine oxidase [copper-containing]-like.
     
 0.902
ENSSGRP00000006312
Inosine triphosphate pyrophosphatase-like.
   
  
 0.627
itpa
Inosine triphosphate pyrophosphatase.
   
  
 0.627
LOC107566211
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2-like.
  
 0.574
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.