STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107554120Histone acetyltransferase KAT8-like. (507 aa)    
Predicted Functional Partners:
ENSSGRP00000012988
Transformation/transcription domain-associated protein-like.
   
 0.886
ENSSGRP00000067675
Transformation/transcription domain-associated protein-like.
   
 0.886
MSL3
Male-specific lethal 3 homolog isoform X1.
    
 0.881
LOC107577758
Chromatin modification-related protein MEAF6-like.
    
 0.876
meaf6
Chromatin modification-related protein MEAF6 isoform X1.
    
 0.876
ENSSGRP00000054385
annotation not available
   
 0.854
ENSSGRP00000039274
KAT8 regulatory NSL complex subunit 1-like protein.
   
 0.849
LOC107584430
RuvB-like protein 1 (pontin 52).
   
 0.848
LOC107568195
RuvB-like protein 1 (pontin 52).
   
 0.848
ENSSGRP00000083488
WRN RecQ like helicase.
    
 0.841
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.