STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107582773Protein phosphatase 1B-like. (527 aa)    
Predicted Functional Partners:
Smad7
Mothers against decapentaplegic homolog 7.
    
 0.652
LOC107585655
Mothers against decapentaplegic homolog 7-like.
    
 0.652
LOC107570993
Catenin beta-1 isoform X1.
   
 
 0.592
ctnnb1
Catenin beta 1.
   
 
 0.574
LOC107602431
Growth/differentiation factor 2-like isoform X1.
    
 
 0.555
ENSSGRP00000029033
Growth differentiation factor 2.
    
 
 0.555
LOC107551190
Growth/differentiation factor 6-A-like.
    
 
 0.550
LOC107600621
Growth/differentiation factor 6-A.
    
 
 0.550
LOC107567301
Insulin-like growth factor-binding protein 2-B.
      
 0.546
LOC107601376
Insulin-like growth factor-binding protein 2-B.
      
 0.546
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.