STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEZ6LSeizure 6-like protein. (870 aa)    
Predicted Functional Partners:
ENSSGRP00000016707
Beta-secretase 2.
   
 0.592
LOC107562815
Beta-site APP-cleaving enzyme 2 (memapsin 1).
   
 0.592
ENSSGRP00000087241
Polyamine-modulated factor 1-like.
    
 0.541
CDK2AP1
Cyclin-dependent kinase 2-associated protein 1.
   
  
 0.523
ENSSGRP00000011528
WD repeat domain 90.
    
 0.519
ENSSGRP00000001831
Cyclin-G-associated kinase-like isoform X1.
    
 0.494
gak
Cyclin-G-associated kinase isoform X1.
    
 0.494
ENSSGRP00000079901
Cyclin G associated kinase.
    
 0.494
srrd
SRR1-like protein.
      
 0.493
LOC107553458
Kinetochore-associated protein NSL1 homolog.
    
 0.491
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.