STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000086129V-type proton ATPase 116 kDa subunit a-like isoform X1. (832 aa)    
Predicted Functional Partners:
LOC107563463
V-type H+-transporting ATPase subunit d.
  
 0.970
LOC107548952
V-type H+-transporting ATPase subunit d.
  
 0.970
LOC107599895
V-type proton ATPase 21 kDa proteolipid subunit.
  
 0.954
ENSSGRP00000060964
V-type H+-transporting ATPase 21kDa proteolipid subunit.
  
 0.954
LOC107566902
V-type H+-transporting ATPase subunit G.
   
 0.947
LOC107590479
V-type H+-transporting ATPase subunit F.
  
 0.937
LOC107557307
V-type H+-transporting ATPase subunit F.
  
 0.937
LOC107568214
V-type proton ATPase subunit D.
  
 0.923
LOC107559096
V-type H+-transporting ATPase subunit D.
  
 0.923
LOC107579815
V-type H+-transporting ATPase subunit E.
  
 0.921
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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