STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
utp23U3 small nucleolar RNA-associated protein 23. (253 aa)    
Predicted Functional Partners:
LOC107572823
Pancreatic secretory granule membrane major glycoprotein GP2-like.
   
 0.993
ENSSGRP00000102732
Matrix metallopeptidase 15a.
   
 0.993
krr1
KRR1 small subunit processome component homolog isoform X1.
   
 0.993
LOC107583586
U3 small nucleolar RNA-associated protein 5.
   
 
 0.980
LOC107583058
U3 small nucleolar RNA-associated protein 5.
   
 
 0.980
utp11
Probable U3 small nucleolar RNA-associated protein 11.
   
 
 0.979
ENSSGRP00000013069
UTP3 small subunit processome component.
   
 
 0.970
ENSSGRP00000026240
annotation not available
   
 
 0.966
ENSSGRP00000066233
annotation not available
   
 
 0.966
ddx52
Probable ATP-dependent RNA helicase DDX52 isoform X1.
   
 0.963
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.