STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000089091Polyubiquitin-B-like isoform X1. (307 aa)    
Predicted Functional Partners:
LOC107572061
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.997
skp1
S-phase kinase-associated protein 1 isoform X1.
   
 0.997
ENSSGRP00000083272
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
0.994
ENSSGRP00000106616
annotation not available
  
0.994
ENSSGRP00000054308
Ubiquitin specific peptidase 8.
   
 0.993
LOC107563735
26S proteasome non-ATPase regulatory subunit 14.
   
 0.993
LOC107563735-2
26S proteasome non-ATPase regulatory subunit 14.
   
 0.993
LOC107592948
Proteasome subunit beta type-2-like.
   
 0.992
LOC107591978
Proteasome subunit beta type-2-like.
   
 0.992
LOC107573823
26S proteasome non-ATPase regulatory subunit 3-like.
   
 0.990
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.