STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRMD4B-2FERM domain containing 4B. (616 aa)    
Predicted Functional Partners:
ENSSGRP00000071715
Cytohesin 4b.
    
 
 0.490
aanat
Arylalkylamine N-acetyltransferase.
      
 0.455
LOC107580133
MyoD family inhibitor domain-containing protein-like isoform X1.
    
 
 0.444
LOC107584008
MyoD family inhibitor domain-containing protein-like isoform X1.
    
 
 0.444
ENSSGRP00000084695
Pleckstrin homology domain containing, family A member 5.
    
 
 0.424
ENSSGRP00000084696
annotation not available
    
 
 0.424
ENSSGRP00000111768
Pleckstrin homology domain containing, family A member 5.
    
 
 0.424
LATS1
Serine/threonine-protein kinase LATS1-like.
    
 
 0.402
ENSSGRP00000044184
LOW QUALITY PROTEIN: serine/threonine-protein kinase LATS1-like.
    
 
 0.402
ENSSGRP00000071677
LOW QUALITY PROTEIN: serine/threonine-protein kinase LATS2-like.
    
 
 0.402
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.