STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107561768BTB/POZ domain-containing protein 9-like. (601 aa)    
Predicted Functional Partners:
LOC107553259
UBX domain-containing protein 7-like.
    
   0.860
LOC107563300
UBX domain-containing protein 7-like isoform X1.
    
   0.860
ENSSGRP00000004573
FAS-associated factor 1-like.
    
   0.846
faf1
FAS-associated factor 1.
    
   0.846
LOC107601482
UBX domain-containing protein 1-like.
    
   0.846
ubxn1
UBX domain-containing protein 1/4.
    
   0.846
mrpl3
39S ribosomal protein L3, mitochondrial isoform X1.
   
 
 0.781
Mrps10
28S ribosomal protein S10, mitochondrial.
   
 
 0.752
ENSSGRP00000011646
annotation not available
   
 
 0.751
Mrpl2
39S ribosomal protein L2, mitochondrial isoform X1.
    
 
 0.751
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.