STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107594301Oxysterol-binding protein 1-like isoform X1. (828 aa)    
Predicted Functional Partners:
ENSSGRP00000006572
Vesicle-associated membrane protein-associated protein A-like.
    
 0.671
vapb
VAMP associated protein B and C.
    
 0.671
ENSSGRP00000078838
Vesicle-associated membrane protein-associated protein A-like.
    
 0.671
LOC107549812
Vesicle-associated membrane protein-associated protein A-like.
    
 0.671
ENSSGRP00000088685
Vesicle-associated membrane protein-associated protein B-like.
    
 0.671
LOC107601124
Motile sperm domain-containing protein 1-like.
    
 0.623
LOC107560686
Motile sperm domain-containing protein 1-like.
    
 0.623
ENSSGRP00000037408
Membrane-associated phosphatidylinositol transfer protein 3-like.
    
 
 0.465
Mtr
5-methyltetrahydrofolate--homocysteine methyltransferase.
      
 0.443
ENSSGRP00000001831
Cyclin-G-associated kinase-like isoform X1.
   
 
 0.431
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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