ENSSGRP00000093560 protein (Sinocyclocheilus grahami)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSSGRP00000093560

Si:ch211-22d5.2. (423 aa)

Predicted Functional Partners:

ENSSGRP00000022696

0.599

LOC107567443

0.599

LOC107554438

0.599

LOC107555518

0.599

PRKAB2

0.599

ENSSGRP00000112965

0.599

LOC107553319

0.579

rptor

0.579

ENSSGRP00000006245

0.564

LOC107554882

0.564

Your Current Organism:

Sinocyclocheilus grahami

NCBI taxonomy Id: 75366
Other names: S. grahami

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSGRP00000006245	ENSSGRP00000022696	ENSSGRP00000006245	ENSSGRP00000022696	5'-AMP-activated protein kinase subunit gamma-1-like.	annotation not available	0.803
ENSSGRP00000006245	ENSSGRP00000093560	ENSSGRP00000006245	ENSSGRP00000093560	5'-AMP-activated protein kinase subunit gamma-1-like.	Si:ch211-22d5.2.	0.564
ENSSGRP00000006245	ENSSGRP00000112965	ENSSGRP00000006245	ENSSGRP00000112965	5'-AMP-activated protein kinase subunit gamma-1-like.	5'-AMP-activated protein kinase, regulatory beta subunit.	0.819
ENSSGRP00000006245	LOC107553319	ENSSGRP00000006245	ENSSGRP00000038059	5'-AMP-activated protein kinase subunit gamma-1-like.	Regulatory-associated protein of mTOR-like isoform X1.	0.589
ENSSGRP00000006245	LOC107554438	ENSSGRP00000006245	ENSSGRP00000040317	5'-AMP-activated protein kinase subunit gamma-1-like.	5'-AMP-activated protein kinase, regulatory beta subunit.	0.819
ENSSGRP00000006245	LOC107555518	ENSSGRP00000006245	ENSSGRP00000042185	5'-AMP-activated protein kinase subunit gamma-1-like.	5'-AMP-activated protein kinase, regulatory beta subunit.	0.826
ENSSGRP00000006245	LOC107567443	ENSSGRP00000006245	ENSSGRP00000037737	5'-AMP-activated protein kinase subunit gamma-1-like.	5'-AMP-activated protein kinase, regulatory beta subunit.	0.826
ENSSGRP00000006245	PRKAB2	ENSSGRP00000006245	ENSSGRP00000089455	5'-AMP-activated protein kinase subunit gamma-1-like.	5'-AMP-activated protein kinase, regulatory beta subunit.	0.803
ENSSGRP00000006245	rptor	ENSSGRP00000006245	ENSSGRP00000084096	5'-AMP-activated protein kinase subunit gamma-1-like.	Regulatory-associated protein of mTOR isoform X1.	0.589
ENSSGRP00000022696	ENSSGRP00000006245	ENSSGRP00000022696	ENSSGRP00000006245	annotation not available	5'-AMP-activated protein kinase subunit gamma-1-like.	0.803
ENSSGRP00000022696	ENSSGRP00000093560	ENSSGRP00000022696	ENSSGRP00000093560	annotation not available	Si:ch211-22d5.2.	0.599
ENSSGRP00000022696	LOC107553319	ENSSGRP00000022696	ENSSGRP00000038059	annotation not available	Regulatory-associated protein of mTOR-like isoform X1.	0.690
ENSSGRP00000022696	LOC107554882	ENSSGRP00000022696	ENSSGRP00000016207	annotation not available	5'-AMP-activated protein kinase subunit gamma-1-like.	0.803
ENSSGRP00000022696	rptor	ENSSGRP00000022696	ENSSGRP00000084096	annotation not available	Regulatory-associated protein of mTOR isoform X1.	0.690
ENSSGRP00000093560	ENSSGRP00000006245	ENSSGRP00000093560	ENSSGRP00000006245	Si:ch211-22d5.2.	5'-AMP-activated protein kinase subunit gamma-1-like.	0.564
ENSSGRP00000093560	ENSSGRP00000022696	ENSSGRP00000093560	ENSSGRP00000022696	Si:ch211-22d5.2.	annotation not available	0.599
ENSSGRP00000093560	ENSSGRP00000112965	ENSSGRP00000093560	ENSSGRP00000112965	Si:ch211-22d5.2.	5'-AMP-activated protein kinase, regulatory beta subunit.	0.599
ENSSGRP00000093560	LOC107553319	ENSSGRP00000093560	ENSSGRP00000038059	Si:ch211-22d5.2.	Regulatory-associated protein of mTOR-like isoform X1.	0.579
ENSSGRP00000093560	LOC107554438	ENSSGRP00000093560	ENSSGRP00000040317	Si:ch211-22d5.2.	5'-AMP-activated protein kinase, regulatory beta subunit.	0.599
ENSSGRP00000093560	LOC107554882	ENSSGRP00000093560	ENSSGRP00000016207	Si:ch211-22d5.2.	5'-AMP-activated protein kinase subunit gamma-1-like.	0.564