STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107588217Ras-related protein Rab-38-like. (224 aa)    
Predicted Functional Partners:
ENSSGRP00000001831
Cyclin-G-associated kinase-like isoform X1.
    
 
 0.720
gak
Cyclin-G-associated kinase isoform X1.
    
 
 0.720
ENSSGRP00000079901
Cyclin G associated kinase.
    
 
 0.720
Rabggta
Geranylgeranyl transferase type-2 subunit alpha.
    
 0.620
LOC107565973
Geranylgeranyl transferase type-2 subunit alpha-like.
    
 0.620
ENSSGRP00000005451
Ankyrin repeat domain 27 (VPS9 domain).
    
 
 0.609
LOC107555697
Ankyrin repeat domain-containing protein 27-like isoform X1.
    
 
 0.609
ENSSGRP00000090841
CHM Rab escort protein.
    
 0.607
ENSSGRP00000110209
Rab proteins geranylgeranyltransferase component A 2-like.
    
 0.607
RABGGTB
Geranylgeranyl transferase type-2 subunit beta-like isoform X1.
     
 0.532
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.