STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000094758annotation not available (65 aa)    
Predicted Functional Partners:
LOC107591335
Peroxisomal biogenesis factor 19-like.
    
 0.870
LOC107557446
Peroxisomal biogenesis factor 19-like.
    
 0.870
ENSSGRP00000020228
Probable lysosomal cobalamin transporter.
    
 0.841
lmbrd1
Probable lysosomal cobalamin transporter.
    
 0.841
pex13
Peroxisome biogenesis factor 13.
   
 
 0.779
RAD51
DNA repair protein RAD51 homolog A-like.
    
 
 0.737
ENSSGRP00000089259
DNA repair protein RAD51 homolog A-like.
    
 
 0.737
rad51
DNA repair protein RAD51 homolog 1.
    
 
 0.737
ENSSGRP00000109741
Sterol carrier protein 2a.
   
 
 0.728
ENSSGRP00000111100
Sterol carrier protein 2b.
   
 
 0.728
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.