STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000095978Coiled-coil domain-containing protein 65-like. (160 aa)    
Predicted Functional Partners:
ENSSGRP00000082114
Growth arrest-specific 8.
  
 
 
 0.828
ENSSGRP00000018141
Coiled-coil domain containing 83.
   
    0.811
ENSSGRP00000012895
Growth arrest-specific protein 8-like.
    
 
 0.786
LOC107597116
Axonemal dynein light intermediate polypeptide 1-like.
    
 
 0.752
LOC107587750
Axonemal dynein light intermediate polypeptide 1-like.
    
 
 0.752
Ccdc40
Coiled-coil domain-containing protein 40.
   
 
 0.747
ENSSGRP00000052733
Coiled-coil domain-containing protein 39-like.
   
 
 0.743
ENSSGRP00000006655
annotation not available
   
   0.737
ENSSGRP00000054134
annotation not available
   
   0.737
ENSSGRP00000057452
Dynein regulatory complex subunit 1 homolog (Chlamydomonas).
  
   
 0.733
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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