STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107580430Tetratricopeptide repeat protein 14-like. (179 aa)    
Predicted Functional Partners:
pnisr
Arginine/serine-rich protein PNISR isoform X1.
   
  0.719
LOC107587767
Arginine/serine-rich protein PNISR-like isoform X1.
   
  0.719
ENSSGRP00000103554
Claudin-18-like.
      
 0.622
ENSSGRP00000047663
Intraflagellar transport protein 81 homolog.
    
 0.588
ift52
Intraflagellar transport protein 52 homolog.
    
 0.552
LOC107548897
U11/U12 small nuclear ribonucleoprotein 65 kDa protein.
   
   0.530
LOC107590356
U11/U12 small nuclear ribonucleoprotein 65 kDa protein.
   
   0.530
LOC107569635
Splicing factor 3B subunit 1 isoform X1.
   
  
 0.513
LOC107595847
Splicing factor 3B subunit 1-like isoform X1.
   
  
 0.513
LOC107590223
Membrane-bound transcription factor site-2 protease-like.
      
 0.491
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.