STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phyhPhytanoyl-CoA dioxygenase, peroxisomal. (334 aa)    
Predicted Functional Partners:
pex7
Peroxisomal biogenesis factor 7.
    
 0.978
pex13
Peroxisome biogenesis factor 13.
     
 0.915
pex10
Peroxisome biogenesis factor 10.
   
 
 0.908
Agps
Alkyldihydroxyacetonephosphate synthase, peroxisomal.
   
 0.883
ENSSGRP00000019424
3-ketoacyl-CoA thiolase B, peroxisomal-like.
   
 
 0.827
LOC107591283
3-ketoacyl-CoA thiolase B, peroxisomal-like.
   
 
 0.827
ENSSGRP00000082599
annotation not available
   
 
 0.827
ENSSGRP00000011127
annotation not available
     
 0.819
ENSSGRP00000020274
Peroxisomal biogenesis factor 14.
    
 0.784
LOC107586529
Peroxisomal membrane protein PEX14-like isoform X1.
    
 0.784
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.