STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000100178Sorbin and SH3 domain containing 2b. (834 aa)    
Predicted Functional Partners:
ENSSGRP00000065942
Vacuolar protein sorting-associated protein VTA1 homolog.
    
   0.711
VTA1
Vacuolar protein sorting-associated protein VTA1 homolog isoform X1.
    
   0.711
ENSSGRP00000004794
LOW QUALITY PROTEIN: vinculin-like.
   
 0.691
ENSSGRP00000006060
annotation not available
   
 0.691
LOC107601794
Vinculin-like.
   
 0.691
ENSSGRP00000044019
Vinculin b.
   
 0.691
ENSSGRP00000049665
Vinculin-like.
   
 0.691
ENSSGRP00000069703
LOW QUALITY PROTEIN: vinculin-like.
   
 0.691
ENSSGRP00000069704
annotation not available
   
 0.691
LOC107557594
Trichohyalin-like.
     
 0.626
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.