STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000100198Phospholipid phosphatase-related protein type 5-like isoform X1. (276 aa)    
Predicted Functional Partners:
ENSSGRP00000006479
Mediator of RNA polymerase II transcription subunit 20.
   
 0.863
LOC107561400
Mediator of RNA polymerase II transcription subunit 7-like.
   
 0.860
LOC107554872
Mediator of RNA polymerase II transcription subunit 8.
    
 0.834
Med9
Mediator of RNA polymerase II transcription subunit 9.
    
 0.816
med17
Mediator of RNA polymerase II transcription subunit 17.
    
 0.804
LOC107562769
Mediator of RNA polymerase II transcription subunit 17-like.
    
 0.804
med1
Mediator of RNA polymerase II transcription subunit 1 isoform X1.
   
 0.803
med11
Mediator of RNA polymerase II transcription subunit 11 isoform X1.
    
 0.802
LOC107595625
Mediator of RNA polymerase II transcription subunit 10.
    
 0.801
ENSSGRP00000042418
Mediator of RNA polymerase II transcription subunit 10-like.
    
 0.801
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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