STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107565944Calcium/calmodulin-dependent serine protein kinase. (951 aa)    
Predicted Functional Partners:
ENSSGRP00000012137
Ubiquitin related modifier 1.
    
 0.978
LOC107560307
Protein lin-7 homolog A-like.
    
 0.978
LOC107595064
Protein lin-7 homolog C.
    
 0.978
LOC107554905
Protein lin-7 homolog C-like.
    
 0.978
LIN7A
Lin-7 homolog A, crumbs cell polarity complex component.
    
 0.978
LOC107548331
Protein lin-7 homolog B.
    
 0.978
LOC107583036
Protein lin-7 homolog B-like.
    
 0.978
LOC107558696
Amyloid beta A4 precursor protein-binding family A member 1-like isoform X1.
   
 0.972
LOC107550530
Amyloid beta A4 precursor protein-binding family A member 3-like isoform X1.
   
 0.972
ENSSGRP00000032812
Amyloid beta (A4) precursor protein-binding, family A, member 1a.
   
 0.972
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.