STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000102691E3 ubiquitin/ISG15 ligase TRIM25-like. (425 aa)    
Predicted Functional Partners:
LOC107583744
ADP-ribosylation factor-like protein 16.
   
 0.649
ENSSGRP00000062884
ADP-ribosylation factor-like 16.
   
 0.649
LOC107599762
P2Y purinoceptor 1-like.
     
 0.631
ENSSGRP00000006061
annotation not available
     
 0.631
TRIM67
Tripartite motif-containing protein 9/67.
     
 0.630
Trim67
Tripartite motif-containing protein 67 isoform X1.
     
 0.630
LOC107586271
Dual specificity tyrosine-phosphorylation-regulated kinase 1A-like.
   
 
 0.627
LOC107597536
Dual specificity tyrosine-phosphorylation-regulated kinase 1A-like isoform X1.
   
 
 0.627
LOC107602117
Interferon regulatory factor 2-binding protein 1.
      
 0.526
LOC107575360
Interferon regulatory factor 2-binding protein 1-like.
      
 0.526
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.