STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107575020Vacuole morphology and inheritance protein 14. (781 aa)    
Predicted Functional Partners:
FIG4
FIG4 phosphoinositide 5-phosphatase.
    
 0.998
ENSSGRP00000104498
1-phosphatidylinositol 3-phosphate 5-kinase-like.
    
 0.986
LOC107595854
1-phosphatidylinositol 3-phosphate 5-kinase-like isoform X1.
    
 0.986
LOC107599840
Deleted in autism protein 1 homolog.
    
 0.952
ENSSGRP00000029305
Deleted in autism protein 1 homolog.
    
 0.952
LOC107588034
Deleted in autism protein 1 homolog isoform X1.
    
 0.952
LOC107565821
Deleted in autism protein 1 homolog.
    
 0.952
ENSSGRP00000003828
WD repeat domain phosphoinositide-interacting protein 2.
    
 
 0.725
wipi2
WD repeat domain phosphoinositide-interacting protein 2 isoform X1.
    
 
 0.725
LOC107601272
WD repeat domain phosphoinositide-interacting protein 1-like isoform X1.
    
 
 0.725
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.