STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107548841Sjoegren syndrome/scleroderma autoantigen 1 homolog isoform X1. (232 aa)    
Predicted Functional Partners:
cct5
T-complex protein 1 subunit epsilon.
    
   0.725
LOC107549193
T-complex protein 1 subunit epsilon-like.
    
   0.725
fam89b
Protein FAM89B.
   
  
 0.638
ENSSGRP00000032672
T-complex protein 1 subunit eta.
    
   0.587
LOC107571935
T-complex protein 1 subunit eta-like.
    
   0.587
LOC107548860
Putative FERM domain-containing protein FRMD8P1.
      
 0.584
LOC107555160
Putative FERM domain-containing protein FRMD8P1.
      
 0.584
LOC107595594
DNA-directed RNA polymerase I subunit RPA12-like.
   
 
 0.553
ENSSGRP00000019441
annotation not available
      
 0.487
ENSSGRP00000058887
annotation not available
      
 0.487
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.