STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSGRP00000108991Transcription factor 2, hepatocyte nuclear factor 1-beta. (538 aa)    
Predicted Functional Partners:
hnf1a
Transcription factor 1, hepatocyte nuclear factor 1-alpha.
  
 
0.739
LOC107550982
Transcription factor 1, hepatocyte nuclear factor 1-alpha.
  
 
0.738
LOC107586418
Pancreas transcription factor 1 subunit alpha.
     
 0.518
LOC107550704
Pancreas transcription factor 1 subunit alpha-like.
     
 0.518
LOC107555709
Iroquois-class homeodomain protein irx-3-like.
    
 
 0.509
LOC107568408
Hepatocyte nuclear factor 4-alpha-like.
   
 0.468
LOC107564652
Hepatocyte nuclear factor 4-alpha-like.
   
 0.468
LOC107590327
Hepatocyte nuclear factor 4-gamma-like isoform X1.
   
 0.468
ENSSGRP00000104173
Hepatocyte nuclear factor 4-gamma-like isoform X1.
   
 0.468
LOC107601888
Pterin-4-alpha-carbinolamine dehydratase-like.
    
 
 0.465
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.