STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fusRNA-binding protein FUS isoform X1. (529 aa)    
Predicted Functional Partners:
LOC107555974
TAR DNA-binding protein 43-like.
   
 0.825
LOC107561006
TAR DNA-binding protein 43-like.
   
 0.825
taf13
Transcription initiation factor TFIID subunit 13.
   
 0.764
taf2
Transcription initiation factor TFIID subunit 2 isoform X1.
     
 0.724
ENSSGRP00000094695
Transcription initiation factor TFIID subunit 3-like.
     
 0.723
ENSSGRP00000020294
TAR DNA-binding protein 43-like isoform X1.
   
 0.706
ENSSGRP00000094900
TAR DNA-binding protein 43-like isoform X1.
   
 0.706
LOC107588503
Transcription initiation factor TFIID subunit 12-like.
   
  0.692
LOC107566933
Transcription initiation factor TFIID subunit 12-like.
   
  0.692
LOC107574147
Transcription initiation factor TFIID subunit 5-like.
    
 0.685
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.