STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107590538Synaptophysin-like protein 1. (239 aa)    
Predicted Functional Partners:
ENSSGRP00000002909
Vesicle-associated membrane protein 2-like.
   
 0.544
LOC107554313
Vesicle-associated membrane protein 2-like.
   
 0.544
ENSSGRP00000063700
Vesicle-associated membrane protein 2-like.
   
 0.544
ENSSGRP00000066179
Vesicle-associated membrane protein 1-like.
   
 0.544
ENSSGRP00000096372
Vesicle-associated membrane protein 2.
   
 0.544
ENSSGRP00000109869
Vesicle-associated membrane protein 2-like isoform X1.
   
 0.544
LOC107592867
Vesicle-associated membrane protein 3-like.
   
 0.513
LOC107582408
Vesicle-associated membrane protein 3-like.
   
 0.513
LOC107595107
Brain-derived neurotrophic factor isoform X1.
      
 0.424
Your Current Organism:
Sinocyclocheilus grahami
NCBI taxonomy Id: 75366
Other names: S. grahami
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.