STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tint_0200KEGG: fal:FRAAL2420 putative iron compounds ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase. (257 aa)    
Predicted Functional Partners:
Tint_0201
PFAM: transport system permease protein; KEGG: ppd:Ppro_1462 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.993
Tint_0203
PFAM: periplasmic binding protein; KEGG: sfu:Sfum_3702 periplasmic binding protein.
 
 
 0.982
Tint_1433
PFAM: transport system permease protein; KEGG: bur:Bcep18194_A5786 ABC cobalamin/Fe3+-siderophore transporter, inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.968
Tint_0204
PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mms:mma_3671 TonB-dependent outer membrane receptor.
 
  
 0.922
Tint_1504
PFAM: periplasmic binding protein; KEGG: dar:Daro_0138 periplasmic binding protein.
 
 
 0.808
Tint_0202
PFAM: Luciferase-like, subgroup; KEGG: xau:Xaut_3263 luciferase family protein.
       0.776
Tint_3174
PFAM: periplasmic binding protein; KEGG: tmz:Tmz1t_0726 periplasmic binding protein.
  
 
 0.719
Tint_0205
KEGG: tro:trd_A0236 hypothetical protein.
     
 0.564
Tint_0198
KEGG: lch:Lcho_0322 methionine biosynthesis protein MetW; TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein.
     
 0.480
metXS
Homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine.
       0.479
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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