STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tint_0314KEGG: bch:Bcen2424_0877 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (256 aa)    
Predicted Functional Partners:
Tint_0315
PFAM: ABC-2 type transporter; KEGG: bcm:Bcenmc03_0847 ABC-2 type transporter.
 
 
 0.999
Tint_1186
PFAM: glycosyl transferase family 2; Methyltransferase type 12; Rhamnan synthesis F; KEGG: pmy:Pmen_2836 glycosyl transferase family protein.
 
 
 0.889
Tint_2090
PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: rfr:Rfer_0658 polysaccharide export protein.
  
  
 0.859
Tint_0326
PFAM: glycosyl transferase family 2; KEGG: hch:HCH_02236 glycosyltransferase.
 
  
 0.680
cysC
Sulfate adenylyltransferase, large subunit; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family.
  
    0.647
Tint_0319
KEGG: min:Minf_2078 hypothetical protein.
  
 
 0.624
Tint_2597
PFAM: phosphoribosyltransferase; KEGG: reh:H16_A0339 amidophosphoribosyltransferase.
   
    0.610
Tint_0318
KEGG: pph:Ppha_0641 TPR repeat-containing protein.
     
 0.583
Tint_0327
PFAM: glycosyl transferase family 2; KEGG: vap:Vapar_0771 glycosyl transferase family protein.
 
  
 0.564
Tint_0317
KEGG: afr:AFE_2970 sulfate adenylyltransferase subunit 2; TIGRFAM: sulfate adenylyltransferase, small subunit; PFAM: phosphoadenosine phosphosulfate reductase.
       0.550
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.