STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tint_0495KEGG: nme:NMB1820 pilin glycosylation protein PglB; manually curated; TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family. (216 aa)    
Predicted Functional Partners:
Tint_0494
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; CBS domain containing protein; KEGG: sal:Sala_1573 DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.980
Tint_0493
PFAM: polysaccharide biosynthesis protein CapD; KEGG: vei:Veis_4862 polysaccharide biosynthesis protein CapD.
 
  
 0.957
Tint_0496
KEGG: lpf:lpl0790 N-acylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; PFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
  
 0.957
Tint_1186
PFAM: glycosyl transferase family 2; Methyltransferase type 12; Rhamnan synthesis F; KEGG: pmy:Pmen_2836 glycosyl transferase family protein.
  
  
 0.936
Tint_2656
Undecaprenyl-phosphate galactose phosphotransferase; KEGG: vei:Veis_3055 sugar transferase; PFAM: sugar transferase.
  
 0.900
Tint_1299
KEGG: tmz:Tmz1t_1597 sugar transferase, PEP-Cterm system associated; TIGRFAM: sugar transferase, PEP-CTERM system associated; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
 
  
 0.856
Tint_2147
PFAM: polysaccharide biosynthesis protein; KEGG: lch:Lcho_3073 polysaccharide biosynthesis protein.
  
  
 0.832
Tint_1737
Glutamine--scyllo-inositol transaminase; KEGG: bte:BTH_I2193 aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.827
Tint_2090
PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: rfr:Rfer_0658 polysaccharide export protein.
  
  
 0.788
Tint_2652
KEGG: mta:Moth_0756 N-acetylneuraminate synthase; PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein.
 
  
 0.754
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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