Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tint_0809PFAM: branched-chain amino acid transport; KEGG: mpt:Mpe_A0288 hypothetical protein. (108 aa)    
Predicted Functional Partners:
Tint_0810
PFAM: AzlC family protein; KEGG: dia:Dtpsy_3399 AzlC family protein.
 
  
 0.903
Tint_2761
PFAM: ATP synthase I chain; KEGG: pol:Bpro_0320 putative ATP synthase protein I.
  
     0.769
Tint_1025
KEGG: mpt:Mpe_A1102 hypothetical protein.
  
     0.763
Tint_0827
Hypothetical protein; KEGG: mpt:Mpe_A0322 putative transmembrane protein.
  
     0.746
Tint_0099
PFAM: Barstar (barnase inhibitor); KEGG: bpy:Bphyt_3395 barstar (barnase inhibitor).
  
     0.729
Tint_3178
KEGG: vap:Vapar_0749 hypothetical protein.
  
     0.720
Tint_2275
PFAM: metallophosphoesterase; KEGG: mpt:Mpe_A3701 calcineurin-like phosphoesterase.
  
     0.701
Tint_0236
PFAM: GCN5-related N-acetyltransferase; KEGG: pol:Bpro_4211 GCN5-related N-acetyltransferase.
  
     0.696
Tint_2771
KEGG: ajs:Ajs_0668 putative general secretory pathway N transmembrane protein.
  
     0.674
Tint_2158
PFAM: RDD domain containing protein; KEGG: rso:RSc2081 hypothetical protein.
  
     0.628
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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