STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tint_0822KEGG: vei:Veis_2634 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein. (371 aa)    
Predicted Functional Partners:
Tint_0823
Two component transcriptional regulator, winged helix family; KEGG: mpt:Mpe_A2643 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver.
 
 
 0.968
Tint_2540
KEGG: lch:Lcho_3970 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver.
  
 
 0.828
Tint_1127
Two component transcriptional regulator, winged helix family; KEGG: tbd:Tbd_2354 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver.
  
 
 0.827
Tint_2970
KEGG: app:CAP2UW1_2346 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver.
  
 
 0.822
Tint_3069
KEGG: dvm:DvMF_1631 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver.
  
 
 0.818
Tint_1844
Two component transcriptional regulator, winged helix family; KEGG: gme:Gmet_0688 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver.
  
 
 0.817
Tint_2680
Two component transcriptional regulator, winged helix family; KEGG: pna:Pnap_3958 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver.
  
 
 0.817
Tint_0679
KEGG: vap:Vapar_2384 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver.
  
 
 0.816
Tint_1366
Two component transcriptional regulator, winged helix family; KEGG: lch:Lcho_1895 osmolarity response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver.
  
 
 0.814
Tint_1277
Two component transcriptional regulator, winged helix family; TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bpy:Bphyt_5224 two component heavy metal response transcriptional regulator, winged helix family; SMART: response regulator receiver.
  
 
 0.809
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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