STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tint_0904PFAM: inner-membrane translocator; KEGG: mpt:Mpe_A1772 putative amino acid transport system permease lipoprotein transmembrane. (414 aa)    
Predicted Functional Partners:
Tint_0905
PFAM: inner-membrane translocator; KEGG: pol:Bpro_2577 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.967
Tint_0906
KEGG: rfr:Rfer_2392 extracellular ligand-binding receptor.
 
    0.943
Tint_0903
KEGG: bxe:Bxe_A1320 branched chain amino acid ABC transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase.
    0.918
Tint_0902
KEGG: mms:mma_1553 amino-acid ATP-binding ABC transporter protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.912
Tint_0172
PFAM: inner-membrane translocator; KEGG: acr:Acry_1051 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
  
    0.811
Tint_0773
PFAM: inner-membrane translocator; KEGG: bbr:BB3789 putative branched-chain amino acid transport permease; Belongs to the binding-protein-dependent transport system permease family.
  
    0.804
Tint_0171
PFAM: Extracellular ligand-binding receptor; Twin-arginine translocation pathway, signal sequence, subgroup; KEGG: acr:Acry_1052 extracellular ligand-binding receptor.
 
    0.793
Tint_0774
PFAM: Extracellular ligand-binding receptor; KEGG: bur:Bcep18194_A3267 branched chain amino acid ABC transporter periplasmic ligand-binding protein.
 
    0.763
Tint_0919
PFAM: inner-membrane translocator; KEGG: acr:Acry_2204 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.738
Tint_0775
KEGG: dac:Daci_5163 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.728
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.