STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tint_1069KEGG: app:CAP2UW1_2537 cytochrome oxidase maturation protein, cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: cytochrome oxidase maturation protein cbb3-type. (72 aa)    
Predicted Functional Partners:
Tint_1068
Heavy metal translocating P-type ATPase; KEGG: rso:RSc1274 cation-transporting ATPase lipoprotein transmembrane; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase.
 
  
 0.908
Tint_1073
Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
  
 0.855
Tint_1071
KEGG: reu:Reut_A2040 cytochrome c oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO.
 
  
 0.812
Tint_1074
TIGRFAM: cytochrome c oxidase accessory protein CcoG; KEGG: reu:Reut_A2037 4Fe-4S ferredoxin, iron-sulfur binding.
 
  
 0.811
Tint_1070
KEGG: rpf:Rpic12D_1197 cytochrome c oxidase, cbb3-type, subunit I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.806
Tint_1075
PFAM: FixH family protein; KEGG: app:CAP2UW1_2531 hypothetical protein.
 
     0.772
Tint_1077
KEGG: rpf:Rpic12D_1205 hypothetical protein.
 
     0.649
Tint_1072
PFAM: Cbb3-type cytochrome oxidase component; KEGG: cja:CJA_2632 cytochrome c oxidase subunit-related protein.
       0.425
Tint_1067
TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase-associated domain protein; helicase domain protein; protein of unknown function DUF1605; KEGG: bvi:Bcep1808_2234 ATP-dependent helicase HrpA; SMART: DEAD-like helicase; AAA ATPase; helicase domain protein.
       0.415
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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