Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tint_1111KEGG: tgr:Tgr7_0684 hypothetical protein. (414 aa)    
Predicted Functional Partners:
Tint_1110
KEGG: tgr:Tgr7_0683 cytochrome c class I.
 
  
 0.959
Tint_2076
KEGG: tgr:Tgr7_0683 cytochrome c class I.
 
  
 0.827
Tint_0012
KEGG: bav:BAV0992 cytochrome d ubiquinol oxidase subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II.
  
 0.786
Tint_0239
KEGG: ava:Ava_B0174 cytochrome bd ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II.
  
 0.786
Tint_2594
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
  
 0.758
Tint_1112
PFAM: cytochrome c class I; KEGG: aha:AHA_4128 cytochrome c-552.
    
  0.743
Tint_0278
PFAM: cytochrome c class I; KEGG: dac:Daci_2499 gluconate 2-dehydrogenase (acceptor).
    
 0.695
Tint_3135
Gluconate 2-dehydrogenase (acceptor); KEGG: pfl:PFL_5004 cytochrome c family protein; PFAM: cytochrome c class I.
    
 0.695
Tint_1073
Cytochrome c oxidase, cbb3-type, subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
    
 0.688
Tint_2080
PFAM: cytochrome c class I; KEGG: hna:Hneap_1848 cytochrome c class I.
 
  
  0.527
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.