Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Tint_1306PFAM: DMSO reductase anchor subunit (DmsC); KEGG: bur:Bcep18194_B1999 DMSO reductase anchor subunit (DmsC). (310 aa)    
Predicted Functional Partners:
Tint_1304
PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: bph:Bphy_6214 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.996
Tint_1305
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: vap:Vapar_3814 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
 
 0.996
Tint_2510
PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: dge:Dgeo_2838 twin-arginine translocation pathway signal.
     
 0.907
Tint_0163
SMART: Rhodanese domain protein; KEGG: hna:Hneap_0198 rhodanese domain protein.
     
  0.900
cysC
Sulfate adenylyltransferase, large subunit; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family.
     
  0.900
Tint_0317
KEGG: afr:AFE_2970 sulfate adenylyltransferase subunit 2; TIGRFAM: sulfate adenylyltransferase, small subunit; PFAM: phosphoadenosine phosphosulfate reductase.
     
  0.900
Tint_1620
KEGG: rpf:Rpic12D_2038 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein.
     
  0.900
Tint_2089
KEGG: pnu:Pnuc_0792 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein.
     
  0.900
Tint_2831
KEGG: ajs:Ajs_1650 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein.
     
  0.900
Tint_2965
SMART: Rhodanese domain protein; KEGG: pnu:Pnuc_0792 rhodanese domain-containing protein.
     
  0.900
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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