STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tint_1358PFAM: Protein of unknown function DUF2069, membrane; KEGG: azo:azo3163 hypothetical protein. (129 aa)    
Predicted Functional Partners:
Tint_1359
PFAM: FAD linked oxidase domain protein; KEGG: mpt:Mpe_A1420 putative oxidoreductase protein.
       0.791
Tint_0991
KEGG: bph:Bphy_1467 phasin family protein; TIGRFAM: phasin family protein; PFAM: Phasin.
  
     0.759
Tint_1357
Flavoprotein WrbA; KEGG: cti:RALTA_A1221 putative TRP repressor binding protein WrbA, multimeric flavodoxin; TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; Belongs to the WrbA family.
       0.759
Tint_0931
KEGG: mpt:Mpe_A3028 hypothetical protein.
  
     0.721
Tint_2308
PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; KEGG: pol:Bpro_2673 multi-sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein.
  
     0.692
Tint_2532
PFAM: ribonuclease II; KEGG: mpt:Mpe_A3199 hypothetical protein.
  
     0.686
Tint_2472
Manually curated; KEGG: cti:RALTA_B1337 hypothetical protein.
  
     0.659
Tint_1619
Rieske (2Fe-2S) iron-sulfur domain protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: mpt:Mpe_A2634 putative dioxygenase (alpha subunit) oxidoreductase protein.
  
     0.648
Tint_1356
Ribonuclease BN; KEGG: mpt:Mpe_A1422 putative ribonuclease BN transmembrane protein; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN.
  
    0.602
Tint_2158
PFAM: RDD domain containing protein; KEGG: rso:RSc2081 hypothetical protein.
  
     0.598
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.