STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tint_2242TIGRFAM: urate catabolism protein; KEGG: pna:Pnap_0355 polysaccharide deacetylase; PFAM: polysaccharide deacetylase. (315 aa)    
Predicted Functional Partners:
Tint_2240
TIGRFAM: hydroxyisourate hydrolase; KEGG: bvi:Bcep1808_1883 transthyretin; PFAM: Transthyretin; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
    0.938
Tint_2243
TIGRFAM: amidase, hydantoinase/carbamoylase family; OHCU decarboxylase; KEGG: mpt:Mpe_A0776 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; peptidase M20; peptidase dimerisation domain protein.
   
 0.928
Tint_2241
KEGG: pol:Bpro_1425 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
 
     0.896
Tint_2244
PFAM: peptidase dimerisation domain protein; peptidase M20; KEGG: mpt:Mpe_A0775 hypothetical protein.
 
     0.849
Tint_2239
PFAM: protein of unknown function DUF989; KEGG: reu:Reut_A2433 hypothetical protein.
 
    0.839
Tint_1636
Xanthine dehydrogenase accessory protein XdhC; KEGG: mpt:Mpe_A0797 molybdenum cofactor sulfurylase; TIGRFAM: xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182.
 
     0.737
Tint_1631
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
   
 0.713
Tint_1634
Xanthine dehydrogenase, small subunit; KEGG: acr:Acry_1155 molybdopterin dehydrogenase, FAD-binding; TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein.
 
     0.702
Tint_1635
TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; KEGG: mpt:Mpe_A0798 xanthine oxidase; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead.
 
     0.696
Tint_2245
KEGG: smt:Smal_0793 hypothetical protein.
       0.550
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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