STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tint_2552PFAM: Integrase catalytic region; KEGG: vap:Vapar_0682 integrase catalytic region. (510 aa)    
Predicted Functional Partners:
Tint_2553
KEGG: vap:Vapar_4314 IstB domain protein ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase.
 
    0.908
Tint_1577
KEGG: ajs:Ajs_3593 IstB ATP binding domain-containing protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase.
 
    0.778
Tint_2487
Manually curated; PFAM: IstB domain protein ATP-binding protein; KEGG: vap:Vapar_4314 IstB domain protein ATP-binding protein; SMART: AAA ATPase.
  
    0.778
Tint_2983
KEGG: vap:Vapar_4314 IstB domain protein ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase.
  
    0.778
Tint_3183
KEGG: vap:Vapar_4314 IstB domain protein ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase.
  
    0.778
Tint_1559
KEGG: pol:Bpro_1939 IstB-like ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; IstB ATP binding domain protein; SMART: AAA ATPase.
 
    0.777
Tint_1082
KEGG: tmz:Tmz1t_3158 IstB domain protein ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase.
  
    0.762
Tint_3013
KEGG: tmz:Tmz1t_3158 IstB domain protein ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase.
  
    0.762
Tint_0504
KEGG: ajs:Ajs_3098 IstB ATP binding domain-containing protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase.
  
    0.712
Tint_1086
KEGG: ajs:Ajs_3098 IstB ATP binding domain-containing protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase.
  
    0.712
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.