STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tint_2684HAD-superfamily hydrolase, subfamily IIB; KEGG: tbd:Tbd_2627 alpha,alpha-trehalose-phosphate synthase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: sucrose-6F-phosphate phosphohydrolase. (256 aa)    
Predicted Functional Partners:
Tint_2683
TIGRFAM: glucosylglycerol-phosphate synthase; KEGG: tbd:Tbd_2626 glucosyl-glycerol-phosphate synthase; PFAM: glycosyl transferase family 20.
  
 0.996
gpsA-2
PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: dsh:Dshi_3830 glycerol-3-phosphate dehydrogenase (NAD(P)(+)); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
       0.774
Tint_2682
PFAM: MscS Mechanosensitive ion channel; KEGG: bgl:bglu_1g13840 mechanosensitive ion channel family protein.
       0.746
Tint_2681
PFAM: MscS Mechanosensitive ion channel; KEGG: rmr:Rmar_0905 MscS mechanosensitive ion channel.
       0.676
Tint_1186
PFAM: glycosyl transferase family 2; Methyltransferase type 12; Rhamnan synthesis F; KEGG: pmy:Pmen_2836 glycosyl transferase family protein.
  
 
 0.572
Tint_2679
KEGG: mpt:Mpe_A0077 putative transmembrane sensor histidine kinase transcription regulator protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two-component sensor kinase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
  
   0.556
Tint_2680
Two component transcriptional regulator, winged helix family; KEGG: pna:Pnap_3958 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver.
     
 0.529
Tint_2424
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
     
 0.524
Tint_0206
PFAM: TOBE domain protein; KEGG: har:HEAR3440 transcriptional repressor for molybdate uptake.
      
 0.465
ribB
Hypothetical protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
     
 0.426
Your Current Organism:
Thiomonas intermedia
NCBI taxonomy Id: 75379
Other names: T. intermedia K12, Thiobacillus intermedius K12, Thiomonas intermedia K12, Thiomonas intermedia str. K12, Thiomonas intermedia strain K12
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.